A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2724355



Internal ID10307991
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:44619159..44620268hg38UCSC Ensembl
Outerchr22:45015039..45016148hg19UCSC Ensembl
Cytoband22q13.31
Allele length
AssemblyAllele length
hg381110
hg191110
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6937470, essv6871599, essv6733330, essv6813051, essv6915662, essv6967654, essv6766441, essv6710439, essv6917252, essv6835994, essv6696830, essv6877560, essv6828836, essv6714069, essv6852972, essv6788945, essv6909891, essv6898488, essv6933104, essv6842797, essv6875364, essv6892183
SamplesSSM027, SSM011, SSM097, SSM042, SSM002, SSM041, SSM092, SSM090, SSM021, SSM047, SSM069, SSM014, SSM086, SSM082, SSM020, SSM016, SSM080, SSM037, SSM076, SSM010, SSM099, SSM063
Known GenesLINC00229
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2724355
Frequency
Sample Size96
Observed Gain0
Observed Loss22
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer