A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2724158



Internal ID9958459
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:33355643..33355772hg38UCSC Ensembl
Outerchr22:33751629..33751758hg19UCSC Ensembl
Cytoband22q12.3
Allele length
AssemblyAllele length
hg38130
hg19130
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6961181, essv6967628, essv6863745, essv6674948, essv6858917, essv6852940
SamplesSSM027, SSM086, SSM088, SSM031, SSM087, SSM026
Known GenesLARGE
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2724158
Frequency
Sample Size96
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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