A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2723960



Internal ID9958260
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:17983203..17983707hg38UCSC Ensembl
Outerchr22:18465969..18466473hg19UCSC Ensembl
Cytoband22q11.21
Allele length
AssemblyAllele length
hg38505
hg19505
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6773210, essv6972024, essv6967597, essv6828797
SamplesSSM065, SSM027, SSM028, SSM080
Known GenesMICAL3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2723960
Frequency
Sample Size96
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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