A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2723611



Internal ID9957911
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:43631750..43632327hg38UCSC Ensembl
Outerchr21:45051631..45052208hg19UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg38578
hg19578
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6925613, essv6780767, essv6843813, essv6972213, essv6832502, essv6776842, essv6824890, essv6769438, essv6954609, essv6917344, essv6816507, essv6961388, essv6816209, essv6921635, essv6801552, essv6784897, essv6797358, essv6967815, essv6928983, essv6937583, essv6714156, essv6902451, essv6859093, essv6941693, essv6853118, essv6946401, essv6733425, essv6666830, essv6773360, essv6682767, essv6950454
SamplesSSM065, SSM022, SSM027, SSM086, SSM033, SSM084, SSM042, SSM064, SSM025, SSM072, SSM071, SSM016, SSM024, SSM067, SSM077, SSM012, SSM017, SSM009, SSM066, SSM028, SSM029, SSM047, SSM021, SSM087, SSM019, SSM023, SSM079, SSM068, SSM026, SSM018, SSM081
Known GenesHSF2BP
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2723611
Frequency
Sample Size96
Observed Gain0
Observed Loss31
Observed Complex0
Frequencyn/a


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