A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2723399



Internal ID10307035
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:37589388..37589841hg38UCSC Ensembl
Outerchr21:38961690..38962143hg19UCSC Ensembl
Cytoband21q22.13
Allele length
AssemblyAllele length
hg38454
hg19454
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6766481, essv6761805, essv6871647, essv6668644, essv6695288, essv6668845, essv6666803, essv6725740, essv6946382, essv6718353, essv6895764, essv6758994, essv6901539, essv6707199
SamplesSSM100, SSM059, SSM045, SSM023, SSM090, SSM061, SSM029, SSM006, SSM040, SSM005, SSM004, SSM098, SSM030, SSM063
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2723399
Frequency
Sample Size96
Observed Gain0
Observed Loss14
Observed Complex0
Frequencyn/a


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