A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2723063



Internal ID10306699
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:10009810..10010310hg38UCSC Ensembl
Outerchr21:10487838..10488338hg19UCSC Ensembl
Cytoband21p11.2
Allele length
AssemblyAllele length
hg38501
hg19501
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6666749, essv6843758, essv6828880, essv6682726, essv6758977, essv6921592, essv6917289, essv6766462, essv6747689, essv6750516, essv6686055, essv6718220, essv6824834, essv6710482, essv6761780, essv6950395, essv6738730, essv6696882, essv6949074, essv6905997, essv6961291, essv6756460, essv6692620, essv6784838, essv6744858, essv6780713, essv6668831, essv6925559, essv6853039, essv6668354, essv6863806
SamplesSSM059, SSM036, SSM024, SSM079, SSM013, SSM050, SSM088, SSM041, SSM058, SSM084, SSM018, SSM061, SSM029, SSM026, SSM017, SSM003, SSM067, SSM086, SSM033, SSM006, SSM068, SSM016, SSM053, SSM080, SSM037, SSM055, SSM034, SSM004, SSM056, SSM030, SSM063
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2723063
Frequency
Sample Size96
Observed Gain0
Observed Loss31
Observed Complex0
Frequencyn/a


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