A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2723024



Internal ID10306660
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:8995345..8996892hg38UCSC Ensembl
Outerchr21:9834178..9835725hg19UCSC Ensembl
Cytoband21p11.2
Allele length
AssemblyAllele length
hg381548
hg191548
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6753419, essv6756456, essv6892200, essv6954549, essv6871616, essv6883163, essv6784828, essv6807270, essv6668310, essv6793138, essv6905991, essv6895724, essv6769406, essv6797300, essv6937525, essv6863799, essv6761776, essv6682715, essv6747685, essv6967716, essv6828869, essv6758974, essv6804314, essv6780707, essv6921585, essv6742039, essv6941623, essv6821041, essv6710473, essv6880330, essv6718033, essv6877589, essv6721849, essv6824826, essv6972133, essv6902400, essv6875609, essv6810249, essv6933149, essv6695043, essv6836026, essv6679007, essv6859005, essv6917283, essv6816459, essv6725696, essv6744853, essv6949017, essv6707162, essv6885884, essv6699498, essv6675030, essv6839831, essv6832442, essv6925556, essv6821040, essv6729480, essv6703708, essv6696880, essv6718187, essv6913859, essv6733368, essv6686051, essv6898508, essv6794154, essv6950387, essv6874602, essv6788987, essv6846870, essv6801489, essv6901503, essv6928934, essv6813073
SamplesSSM100, SSM059, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM064, SSM079, SSM087, SSM038, SSM097, SSM039, SSM013, SSM073, SSM093, SSM074, SSM088, SSM041, SSM057, SSM058, SSM028, SSM092, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM017, SSM019, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM033, SSM006, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM091, SSM055, SSM070, SSM095, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM098, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2723024
Frequency
Sample Size96
Observed Gain0
Observed Loss72
Observed Complex0
Frequencyn/a


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