A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2722989



Internal ID10306625
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:8548624..8549436hg38UCSC Ensembl
Outerchr21:9437457..9438269hg19UCSC Ensembl
Cytoband21p11.2
Allele length
AssemblyAllele length
hg38813
hg19813
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6858996, essv6695009, essv6967711, essv6888897, essv6868591, essv6747683, essv6863795, essv6744850
SamplesSSM027, SSM087, SSM088, SSM096, SSM089, SSM053, SSM005, SSM055
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2722989
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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