A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2722645



Internal ID10306281
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:60087418..60087783hg38UCSC Ensembl
Outerchr20:58662473..58662838hg19UCSC Ensembl
Cytoband20q13.33
Allele length
AssemblyAllele length
hg38366
hg19366
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6868282, essv6888702, essv6824550, essv6703445, essv6792840, essv6797016, essv6685835, essv6812871, essv6868281, essv6892014, essv6729211
SamplesSSM071, SSM046, SSM079, SSM097, SSM039, SSM096, SSM089, SSM076, SSM070, SSM034
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2722645
Frequency
Sample Size96
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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