A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2722291



Internal ID10305927
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:22674682..22675042hg38UCSC Ensembl
Outerchr20:22655320..22655680hg19UCSC Ensembl
Cytoband20p11.21
Allele length
AssemblyAllele length
hg38361
hg19361
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6692350, essv6788692, essv6941303, essv6784517, essv6937146, essv6913524, essv6710238, essv6780359, essv6880118, essv6882958, essv6905726, essv6873498, essv6776546, essv6839512, essv6820712, essv6807034, essv6971776, essv6792803, essv6665666, essv6898267, essv6901284, essv6725394, essv6721563, essv6772984, essv6678727, essv6967254, essv6832163, essv6738508, essv6703411, essv6685804
SamplesSSM100, SSM036, SSM083, SSM027, SSM045, SSM011, SSM065, SSM039, SSM013, SSM093, SSM050, SSM074, SSM041, SSM028, SSM021, SSM069, SSM094, SSM032, SSM067, SSM044, SSM066, SSM068, SSM081, SSM015, SSM078, SSM022, SSM070, SSM034, SSM004, SSM099
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2722291
Frequency
Sample Size96
Observed Gain0
Observed Loss30
Observed Complex0
Frequencyn/a


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