A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2722290



Internal ID10305926
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:22538795..22538990hg38UCSC Ensembl
Outerchr20:22519433..22519628hg19UCSC Ensembl
Cytoband20p11.21
Allele length
AssemblyAllele length
hg38196
hg19196
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6932839, essv6852622, essv6880117, essv6868237, essv6828588, essv6888686, essv6858562, essv6678726, essv6796975, essv6960791, essv6835729, essv6666225, essv6863441, essv6807033, essv6725393, essv6710237, essv6674594
SamplesSSM071, SSM045, SSM087, SSM093, SSM074, SSM088, SSM041, SSM029, SSM096, SSM026, SSM089, SSM032, SSM031, SSM086, SSM082, SSM020, SSM080
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2722290
Frequency
Sample Size96
Observed Gain0
Observed Loss17
Observed Complex0
Frequencyn/a


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