A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2721887



Internal ID9956185
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:240019529..240019864hg38UCSC Ensembl
Outerchr2:240958946..240959281hg19UCSC Ensembl
Cytoband2q37.3
Allele length
AssemblyAllele length
hg38336
hg19336
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6859788, essv6833032, essv6878013, essv6892751, essv6669769, essv6825518, essv6973281, essv6848198, essv6872096, essv6880773, essv6853992, essv6962355, essv6889438, essv6686553, essv6797980, essv6718614, essv6864573, essv6793802, essv6817171, essv6906628
SamplesSSM027, SSM082, SSM091, SSM078, SSM088, SSM089, SSM031, SSM035, SSM072, SSM071, SSM094, SSM097, SSM093, SSM011, SSM029, SSM087, SSM044, SSM014, SSM098, SSM080
Known GenesNDUFA10
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2721887
Frequency
Sample Size96
Observed Gain0
Observed Loss20
Observed Complex0
Frequencyn/a


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