A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2721772



Internal ID10305408
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:238500695..238501059hg38UCSC Ensembl
Outerchr2:239409336..239409700hg19UCSC Ensembl
Cytoband2q37.3
Allele length
AssemblyAllele length
hg38365
hg19365
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6804792, essv6973264, essv6669758, essv6836639, essv6675678, essv6955586, essv6700146, essv6880765, essv6785524, essv6878008, essv6853978, essv6726314, essv6906619, essv6807763
SamplesSSM083, SSM075, SSM046, SSM087, SSM039, SSM093, SSM074, SSM069, SSM029, SSM026, SSM094, SSM032, SSM031, SSM014
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2721772
Frequency
Sample Size96
Observed Gain0
Observed Loss14
Observed Complex0
Frequencyn/a


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