A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2721738



Internal ID9956036
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:237681657..237681977hg38UCSC Ensembl
Outerchr2:238590300..238590620hg19UCSC Ensembl
Cytoband2q37.3
Allele length
AssemblyAllele length
hg38321
hg19321
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6872094, essv6789660, essv6951047, essv6793792, essv6853974, essv6875081, essv6847791, essv6722456
SamplesSSM071, SSM045, SSM087, SSM092, SSM086, SSM091, SSM070, SSM025
Known GenesLRRFIP1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2721738
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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