A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2721384



Internal ID9955680
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:200910977..200911138hg38UCSC Ensembl
Outerchr1:200880105..200880266hg19UCSC Ensembl
Cytoband1q32.1
Allele length
AssemblyAllele length
hg38162
hg19162
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6950702, essv6749909, essv6954985
SamplesSSM025, SSM026, SSM008
Known GenesC1orf106
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2721384
Frequency
Sample Size96
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer