A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2721010



Internal ID9955306
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:156490947..156491108hg38UCSC Ensembl
Outerchr2:157347459..157347620hg19UCSC Ensembl
Cytoband2q24.1
Allele length
AssemblyAllele length
hg38162
hg19162
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6847667, essv6938094, essv6942263
SamplesSSM022, SSM086, SSM023
Known GenesGPD2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2721010
Frequency
Sample Size96
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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