A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2720474



Internal ID9954770
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:105054290..105055166hg38UCSC Ensembl
Outerchr2:105670748..105671624hg19UCSC Ensembl
Cytoband2q12.1
Allele length
AssemblyAllele length
hg38877
hg19877
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6807642, essv6879843, essv6669536, essv6962107, essv6846976, essv6880673, essv6955352, essv6886243, essv6972991, essv6686447, essv6739125, essv6853766, essv6675549, essv6906460, essv6726195, essv6759323, essv6859591, essv6697954, essv6847579, essv6874982, essv6764402
SamplesSSM027, SSM092, SSM086, SSM006, SSM061, SSM088, SSM031, SSM035, SSM032, SSM094, SSM012, SSM011, SSM029, SSM063, SSM087, SSM046, SSM096, SSM052, SSM075, SSM026, SSM014
Known GenesMRPS9
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2720474
Frequency
Sample Size96
Observed Gain0
Observed Loss21
Observed Complex0
Frequencyn/a


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