A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2720085



Internal ID9954381
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:54956144..54956276hg38UCSC Ensembl
Outerchr2:55183281..55183413hg19UCSC Ensembl
Cytoband2p16.1
Allele length
AssemblyAllele length
hg38133
hg19133
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6686407
SamplesSSM035
Known GenesEML6
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2720085
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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