Variant DetailsVariant: esv2720024 Internal ID | 9954320 | Landmark | | Location Information | | Cytoband | 2p21 | Allele length | Assembly | Allele length | hg38 | 791 | hg19 | 791 |
| Variant Type | CNV deletion | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | essv6962035, essv6877873, essv6946799, essv6773737, essv6859533, essv6759291, essv6777241, essv6942156, essv6922057, essv6729919, essv6840281, essv6883472, essv6807605, essv6797782, essv6739085, essv6955276, essv6753743, essv6950868, essv6704124, essv6937995, essv6683084, essv6886209, essv6818965, essv6722296, essv6745161, essv6793619, essv6769846, essv6667059, essv6748015, essv6853691, essv6718463, essv6844134, essv6750829, essv6874951, essv6710884, essv6821481, essv6836486, essv6756756, essv6868949, essv6929412, essv6968287, essv6789496, essv6679479, essv6785329, essv6766768, essv6933639, essv6902816, essv6689547, essv6952762, essv6832860, essv6751320, essv6693123, essv6879464, essv6787109, essv6871951, essv6736212, essv6864329, essv6721066, essv6919440, essv6714556, essv6917749, essv6671554, essv6742381, essv6697197, essv6801846, essv6972898, essv6896056, essv6847502, essv6707544, essv6675503, essv6910375, essv6813436, essv6825313, essv6726146, essv6781209, essv6669466 | Samples | SSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM064, SSM079, SSM065, SSM087, SSM038, SSM013, SSM009, SSM073, SSM093, SSM050, SSM042, SSM088, SSM041, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM096, SSM026, SSM089, SSM017, SSM032, SSM003, SSM031, SSM067, SSM044, SSM086, SSM033, SSM066, SSM085, SSM068, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM053, SSM005, SSM080, SSM037, SSM077, SSM022, SSM010, SSM091, SSM055, SSM070, SSM095, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM056, SSM030, SSM012 | Known Genes | MSH2 | Method | Sequencing | Analysis | Breakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads | Platform | Illumina HiSeq 2000 | Comments | | Reference | Wong_et_al_2012b | Pubmed ID | 23290073 | Accession Number(s) | esv2720024
| Frequency | Sample Size | 96 | Observed Gain | 0 | Observed Loss | 76 | Observed Complex | 0 | Frequency | n/a |
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