A curated catalogue of human genomic structural variation

Variant Details

Variant: esv2720008

Internal ID9954304
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:45414494..45415534hg38UCSC Ensembl
Outerchr2:45641633..45642673hg19UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6733693, essv6910371, essv6667058, essv6801842, essv6853685, essv6914234, essv6933637, essv6847496, essv6764368, essv6925958, essv6955270, essv6748014, essv6952740, essv6777239, essv6769844, essv6972892, essv6818954, essv6762022, essv6819597, essv6844132, essv6750828, essv6697665, essv6871949, essv6751287, essv6929409, essv6754153, essv6859528, essv6756755, essv6669460, essv6816930, essv6917747, essv6773735, essv6759290, essv6753741, essv6962030, essv6840278, essv6874949, essv6721055, essv6922055, essv6864325, essv6883470, essv6879431, essv6919418, essv6950867, essv6742379, essv6722294, essv6679477
SamplesSSM010, SSM065, SSM007, SSM027, SSM092, SSM053, SSM086, SSM006, SSM091, SSM033, SSM084, SSM061, SSM078, SSM088, SSM089, SSM031, SSM025, SSM020, SSM016, SSM057, SSM001, SSM045, SSM067, SSM062, SSM012, SSM056, SSM085, SSM017, SSM066, SSM029, SSM003, SSM095, SSM030, SSM073, SSM021, SSM002, SSM063, SSM087, SSM019, SSM004, SSM015, SSM026, SSM049, SSM008, SSM018, SSM058, SSM059
Known GenesSRBD1
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Pubmed ID23290073
Accession Number(s)esv2720008
Sample Size96
Observed Gain0
Observed Loss47
Observed Complex0

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