A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2719076



Internal ID9953368
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:57499271..57499917hg38UCSC Ensembl
Outerchr19:58010639..58011285hg19UCSC Ensembl
Cytoband19q13.43
Allele length
AssemblyAllele length
hg38647
hg19647
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6832359, essv6689105, essv6863705, essv6858867, essv6967587, essv6721766, essv6820962, essv6678938, essv6725588, essv6835948, essv6703616, essv6895641, essv6828793, essv6928865, essv6950276, essv6954444, essv6674901, essv6888838, essv6703615
SamplesSSM027, SSM024, SSM045, SSM087, SSM039, SSM088, SSM096, SSM019, SSM035, SSM032, SSM031, SSM044, SSM081, SSM082, SSM078, SSM080, SSM025, SSM098
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2719076
Frequency
Sample Size96
Observed Gain0
Observed Loss18
Observed Complex0
Frequencyn/a


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