A curated catalogue of human genomic structural variation

Variant Details

Variant: esv2719074

Internal ID9953366
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:57498922..57500044hg38UCSC Ensembl
Outerchr19:58010290..58011412hg19UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6678938, essv6941513, essv6913753, essv6895641, essv6858867, essv6735859, essv6877508, essv6948329, essv6842353, essv6801398, essv6972014, essv6852891, essv6703616, essv6703615, essv6937415, essv6863705, essv6950276, essv6761716, essv6921466, essv6674901, essv6933050, essv6820962, essv6782521, essv6928865, essv6746843, essv6668778, essv6902313, essv6758916, essv6733264, essv6741966, essv6954444, essv6696774, essv6714010, essv6666586, essv6682624, essv6773204, essv6717928, essv6961120, essv6828793, essv6780593, essv6832359, essv6689105, essv6967587, essv6721766, essv6776726, essv6784723, essv6835948, essv6797201, essv6888838, essv6725588
SamplesSSM010, SSM065, SSM022, SSM007, SSM027, SSM092, SSM082, SSM086, SSM033, SSM061, SSM042, SSM078, SSM043, SSM088, SSM031, SSM035, SSM025, SSM072, SSM020, SSM071, SSM032, SSM039, SSM024, SSM045, SSM067, SSM012, SSM017, SSM066, SSM028, SSM029, SSM003, SSM030, SSM047, SSM021, SSM037, SSM087, SSM019, SSM096, SSM052, SSM068, SSM044, SSM015, SSM026, SSM049, SSM008, SSM098, SSM059, SSM081, SSM080
Known GenesZNF773
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Pubmed ID23290073
Accession Number(s)esv2719074
Sample Size96
Observed Gain0
Observed Loss49
Observed Complex0

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