A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2718846



Internal ID9953138
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:53905904..53906270hg38UCSC Ensembl
Outerchr19:54409158..54409524hg19UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg38367
hg19367
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6852860
SamplesSSM086
Known GenesPRKCG
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2718846
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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