A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717725



Internal ID10301361
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:535833..536318hg38UCSC Ensembl
Outerchr19:535833..536318hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38486
hg19486
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6773067, essv6769219, essv6967375, essv6960900, essv6725450, essv6839599
SamplesSSM083, SSM027, SSM045, SSM064, SSM065, SSM026
Known GenesCDC34
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717725
Frequency
Sample Size96
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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