A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717683



Internal ID9951974
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:79739844..79740131hg38UCSC Ensembl
Outerchr18:77499844..77500131hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38288
hg19288
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6852566, essv6666164, essv6960745, essv6807010, essv6863404, essv6674551, essv6873231, essv6909668, essv6812827, essv6868196, essv6717685, essv6941276, essv6905712
SamplesSSM022, SSM013, SSM086, SSM043, SSM088, SSM089, SSM031, SSM011, SSM029, SSM074, SSM026, SSM014, SSM076
Known GenesCTDP1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717683
Frequency
Sample Size96
Observed Gain0
Observed Loss13
Observed Complex0
Frequencyn/a


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