A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717657



Internal ID9951948
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:79549972..79552065hg38UCSC Ensembl
Outerchr18:77309972..77312065hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg382094
hg192094
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6858522, essv6916934, essv6710212, essv6871346, essv6779810, essv6885643, essv6699307, essv6735718, essv6682394, essv6692322, essv6796938, essv6932803, essv6812826, essv6873220, essv6863400, essv6678690, essv6780336, essv6674547, essv6820670, essv6812932, essv6898249, essv6945950, essv6738482, essv6901259, essv6753183, essv6840609, essv6792767, essv6747428, essv6832133, essv6750267, essv6950001, essv6874296, essv6763901, essv6909667, essv6888672, essv6758781, essv6703372, essv6895415, essv6716076, essv6843355, essv6913495, essv6967209, essv6835702, essv6666160, essv6946041, essv6846584, essv6807008, essv6954175, essv6913807, essv6882936, essv6729146, essv6717683, essv6696489, essv6928659, essv6744887, essv6713774, essv6761561, essv6804117, essv6771375, essv6776515, essv6925177, essv6688958, essv6766241, essv6971748, essv6756195, essv6868192, essv6880099, essv6905711, essv6668637, essv6721530, essv6788659, essv6828555, essv6921132, essv6824485, essv6852561, essv6810023, essv6769159, essv6665444, essv6741774, essv6960741
SamplesSSM100, SSM059, SSM036, SSM008, SSM071, SSM027, SSM024, SSM075, SSM046, SSM011, SSM064, SSM079, SSM087, SSM038, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM088, SSM002, SSM041, SSM057, SSM023, SSM058, SSM028, SSM084, SSM090, SSM018, SSM069, SSM061, SSM029, SSM096, SSM062, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM006, SSM085, SSM081, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM080, SSM037, SSM076, SSM010, SSM091, SSM055, SSM070, SSM095, SSM025, SSM004, SSM099, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM063
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717657
Frequency
Sample Size96
Observed Gain0
Observed Loss80
Observed Complex0
Frequencyn/a


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