A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717620



Internal ID9951911
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:79014229..79017111hg38UCSC Ensembl
Outerchr18:76774229..76777111hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg382883
hg192883
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6868186, essv6812823, essv6756192, essv6928655, essv6666150, essv6932799, essv6788653, essv6937113, essv6725349, essv6666151, essv6682390, essv6792758, essv6756191, essv6824481, essv6692920, essv6729138, essv6971743, essv6954167, essv6945945, essv6753178, essv6696480, essv6776512, essv6713771, essv6776510, essv6725350, essv6692315, essv6780329, essv6780328, essv6928654
SamplesSSM036, SSM045, SSM046, SSM079, SSM042, SSM057, SSM023, SSM058, SSM028, SSM021, SSM069, SSM029, SSM089, SSM019, SSM067, SSM033, SSM066, SSM020, SSM005, SSM037, SSM076, SSM070, SSM025
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717620
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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