A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717595



Internal ID9951886
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:78840124..78840420hg38UCSC Ensembl
Outerchr18:76600124..76600420hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38297
hg19297
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6729135, essv6925168, essv6788652, essv6928653, essv6674534, essv6776509, essv6901252, essv6744854, essv6885638, essv6921123, essv6913488, essv6945939, essv6665378, essv6852548, essv6835694, essv6772950, essv6678681, essv6873176, essv6932792
SamplesSSM100, SSM046, SSM011, SSM065, SSM023, SSM018, SSM069, SSM017, SSM019, SSM032, SSM031, SSM086, SSM066, SSM082, SSM020, SSM007, SSM015, SSM095, SSM004
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717595
Frequency
Sample Size96
Observed Gain0
Observed Loss19
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer