A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717570



Internal ID9951861
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:78654555..78655358hg38UCSC Ensembl
Outerchr18:76414555..76415358hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38804
hg19804
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6885636, essv6688954, essv6820663, essv6888667, essv6780320
SamplesSSM096, SSM035, SSM067, SSM078, SSM095
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717570
Frequency
Sample Size96
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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