A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717489



Internal ID9951780
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:77969730..77970018hg38UCSC Ensembl
Outerchr18:75681686..75681974hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38289
hg19289
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6905688, essv6909653, essv6828541, essv6967176, essv6769147, essv6921112, essv6804108, essv6696466, essv6852533, essv6868175, essv6945927
SamplesSSM027, SSM064, SSM013, SSM073, SSM023, SSM089, SSM017, SSM014, SSM086, SSM080, SSM037
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717489
Frequency
Sample Size96
Observed Gain0
Observed Loss11
Observed Complex0
Frequencyn/a


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