A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2717453



Internal ID9951744
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:77373383..77373471hg38UCSC Ensembl
Outerchr18:75085339..75085427hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg3889
hg1989
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6858494, essv6960703, essv6820652, essv6863380, essv6674508
SamplesSSM087, SSM088, SSM026, SSM031, SSM078
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2717453
Frequency
Sample Size96
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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