A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2716535



Internal ID10300171
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:82764826..82765105hg38UCSC Ensembl
Outerchr17:80722702..80722981hg19UCSC Ensembl
Cytoband17q25.3
Allele length
AssemblyAllele length
hg38280
hg19280
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv440e201
Supporting Variantsessv6898174, essv6916837, essv6678566, essv6812747, essv6858343, essv6888584, essv6820536, essv6868067, essv6868068, essv6688878
SamplesSSM087, SSM096, SSM089, SSM035, SSM032, SSM078, SSM016, SSM076, SSM099
Known GenesTBCD
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2716535
Frequency
Sample Size96
Observed Gain0
Observed Loss9
Observed Complex0
Frequencyn/a


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