A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2716258



Internal ID9950546
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:76705883..76706611hg38UCSC Ensembl
Outerchr17:74701965..74702693hg19UCSC Ensembl
Cytoband17q25.1
Allele length
AssemblyAllele length
hg38729
hg19729
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6725215, essv6852337, essv6732878, essv6665894, essv6717544, essv6750155, essv6688865, essv6901972, essv6776395, essv6954025, essv6925042, essv6928544, essv6744502, essv6778443, essv6971601, essv6780181, essv6882841, essv6809926, essv6753070, essv6832008, essv6960498
SamplesSSM053, SSM086, SSM043, SSM035, SSM025, SSM057, SSM045, SSM067, SSM094, SSM012, SSM056, SSM066, SSM028, SSM029, SSM047, SSM019, SSM075, SSM026, SSM008, SSM018, SSM081
Known GenesMXRA7
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2716258
Frequency
Sample Size96
Observed Gain0
Observed Loss21
Observed Complex0
Frequencyn/a


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