A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2715873



Internal ID9950160
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:107644829..107645026hg38UCSC Ensembl
Outerchr1:108187451..108187648hg19UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg38198
hg19198
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6729703, essv6769604
SamplesSSM065, SSM047
Known GenesVAV3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2715873
Frequency
Sample Size96
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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