A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2715858



Internal ID10299494
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:34157553..34158256hg38UCSC Ensembl
Outerchr17:32484572..32485275hg19UCSC Ensembl
Cytoband17q12
Allele length
AssemblyAllele length
hg38704
hg19704
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6761438, essv6780127, essv6874155, essv6901928, essv6966906, essv6932614, essv6831963, essv6941079, essv6901120, essv6806875, essv6756057, essv6800962, essv6846467, essv6835528, essv6839316, essv6949799, essv6706818, essv6692167, essv6867988, essv6898117, essv6920935, essv6717496, essv6784291, essv6778010, essv6936926, essv6674259, essv6696281
SamplesSSM100, SSM036, SSM008, SSM083, SSM027, SSM024, SSM074, SSM058, SSM021, SSM061, SSM089, SSM017, SSM031, SSM067, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM037, SSM022, SSM091, SSM099, SSM043, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2715858
Frequency
Sample Size96
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


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