A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2715524



Internal ID9949811
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:3031765..3032351hg38UCSC Ensembl
Outerchr17:2935059..2935645hg19UCSC Ensembl
Cytoband17p13.3
Allele length
AssemblyAllele length
hg38587
hg19587
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6846436, essv6717456, essv6909477
SamplesSSM043, SSM085, SSM014
Known GenesRAP1GAP2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2715524
Frequency
Sample Size96
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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