A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2715369



Internal ID10299005
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:820387..821693hg38UCSC Ensembl
Outerchr17:723627..724933hg19UCSC Ensembl
Cytoband17p13.3
Allele length
AssemblyAllele length
hg381307
hg191307
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6766123, essv6763768, essv6777544, essv6776305, essv6936869, essv6668515, essv6758629, essv6761397, essv6665715, essv6912296, essv6682180, essv6747266, essv6735574, essv6738314, essv6758042, essv6756017, essv6714676, essv6741584, essv6839098, essv6772726, essv6820397, essv6913246, essv6810977, essv6953931
SamplesSSM059, SSM008, SSM065, SSM009, SSM050, SSM002, SSM058, SSM021, SSM061, SSM029, SSM062, SSM001, SSM033, SSM066, SSM006, SSM015, SSM078, SSM010, SSM055, SSM025, SSM052, SSM049, SSM030, SSM063
Known GenesNXN
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2715369
Frequency
Sample Size96
Observed Gain0
Observed Loss24
Observed Complex0
Frequencyn/a


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