A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2715164



Internal ID9949450
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:89455024..89455265hg38UCSC Ensembl
Outerchr16:89521432..89521673hg19UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg38242
hg19242
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6895196, essv6932538, essv6713548, essv6916714, essv6971479, essv6784224, essv6800894, essv6732762, essv6796672, essv6780058, essv6835466, essv6941004, essv6843089, essv6776288, essv6721301, essv6953900, essv6725104, essv6936843, essv6706755, essv6913222
SamplesSSM071, SSM045, SSM042, SSM028, SSM084, SSM021, SSM047, SSM067, SSM044, SSM066, SSM068, SSM040, SSM072, SSM082, SSM020, SSM015, SSM016, SSM022, SSM025, SSM098
Known GenesANKRD11
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2715164
Frequency
Sample Size96
Observed Gain0
Observed Loss20
Observed Complex0
Frequencyn/a


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