A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2715159



Internal ID10298795
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:89421139..89421423hg38UCSC Ensembl
Outerchr16:89487547..89487831hg19UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg38285
hg19285
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6920850, essv6953898, essv6706752, essv6780056
SamplesSSM017, SSM067, SSM040, SSM025
Known GenesANKRD11
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2715159
Frequency
Sample Size96
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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