A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2715010



Internal ID9949295
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:88492602..88493324hg38UCSC Ensembl
Outerchr16:88559010..88559732hg19UCSC Ensembl
Cytoband16q24.2
Allele length
AssemblyAllele length
hg38723
hg19723
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6714565, essv6756001, essv6932528, essv6858124, essv6806819, essv6803929, essv6766110, essv6812656, essv6752983, essv6750075
SamplesSSM006, SSM020, SSM057, SSM056, SSM073, SSM063, SSM087, SSM074, SSM076, SSM058
Known GenesZFPM1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2715010
Frequency
Sample Size96
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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