A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2714946



Internal ID9949231
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:87975726..87976048hg38UCSC Ensembl
Outerchr16:88009332..88009654hg19UCSC Ensembl
Cytoband16q24.2
Allele length
AssemblyAllele length
hg38323
hg19323
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6784212, essv6924922, essv6839243, essv6674145, essv6945627, essv6696188, essv6815971, essv6920827, essv6772676, essv6721286
SamplesSSM083, SSM065, SSM023, SSM018, SSM017, SSM031, SSM044, SSM068, SSM037, SSM077
Known GenesBANP
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2714946
Frequency
Sample Size96
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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