A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2714861



Internal ID10298497
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:85963306..85963952hg38UCSC Ensembl
Outerchr16:85996912..85997558hg19UCSC Ensembl
Cytoband16q24.1
Allele length
AssemblyAllele length
hg38647
hg19647
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6815964, essv6682135, essv6912118, essv6839234, essv6696183, essv6824220, essv6688774, essv6678426, essv6792467, essv6780027, essv6800869, essv6763744, essv6806813, essv6932513, essv6867896, essv6888480, essv6885471, essv6692103, essv6756153, essv6835448, essv6810676, essv6735556, essv6877121, essv6732738, essv6924916, essv6703068, essv6871198, essv6725075, essv6761372, essv6874095, essv6820357, essv6752973, essv6772668, essv6713528, essv6852128, essv6928439
SamplesSSM036, SSM083, SSM045, SSM011, SSM079, SSM065, SSM039, SSM009, SSM074, SSM042, SSM002, SSM057, SSM092, SSM047, SSM018, SSM061, SSM096, SSM062, SSM089, SSM019, SSM035, SSM032, SSM067, SSM001, SSM086, SSM033, SSM072, SSM082, SSM020, SSM078, SSM037, SSM077, SSM091, SSM070, SSM095, SSM049
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2714861
Frequency
Sample Size96
Observed Gain0
Observed Loss36
Observed Complex0
Frequencyn/a


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