A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2714453



Internal ID9948737
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:49506491..49506614hg38UCSC Ensembl
Outerchr16:49540402..49540525hg19UCSC Ensembl
Cytoband16q12.1
Allele length
AssemblyAllele length
hg38124
hg19124
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6867855, essv6820317, essv6858058, essv6852073, essv6674072, essv6966692
SamplesSSM027, SSM087, SSM089, SSM031, SSM086, SSM078
Known GenesZNF423
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2714453
Frequency
Sample Size96
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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