Variant Details

Variant: esv2714356

Internal ID

10297992

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Outer	chr16:46387796..46393907	hg19	UCSC Ensembl

Cytoband

16q11.2

Allele length

Assembly	Allele length
hg19	6112

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv351e201

Supporting Variants

essv6665531, essv6815908, essv6690866, essv6928368, essv6688731, essv6685534, essv6960184, essv6828248, essv6960172, essv6870586, essv6867823, essv6824165, essv6913114, essv6953816, essv6725005, essv6852045, essv6732657, essv6692061, essv6839180, essv6709946, essv6682064, essv6895124, essv6725004, essv6685525, essv6842972, essv6685542, essv6842973, essv6709937, essv6703000, essv6702997, essv6858045, essv6828257, essv6828256, essv6809784, essv6835382, essv6800796, essv6932431, essv6717322, essv6692042, essv6852046, essv6949633, essv6835385, essv6800795, essv6966631, essv6717329, essv6674007, essv6932420, essv6713467, essv6928369, essv6835380, essv6713451, essv6776193, essv6966651, essv6696123, essv6824144, essv6960188, essv6966646, essv6928367, essv6909397, essv6784133, essv6800807, essv6696122, essv6674016, essv6688706, essv6966630, essv6949639, essv6949656, essv6971386, essv6706673, essv6685524, essv6784128, essv6717328, essv6815893, essv6678353, essv6966645, essv6685528, essv6702994, essv6966649, essv6870609, essv6725003, essv6839151, essv6721214, essv6721204, essv6721213, essv6895151, essv6824139, essv6709949, essv6824140, essv6928366, essv6895132, essv6717330, essv6788300, essv6971381, essv6690732, essv6788301, essv6901025, essv6800774, essv6776196, essv6796593, essv6772607, essv6688730, essv6867822, essv6721205, essv6824146, essv6796595, essv6971401, essv6692049, essv6674014, essv6702999, essv6674019, essv6788314, essv6824138, essv6674041, essv6895130, essv6835383, essv6690710, essv6815906, essv6713457, essv6916600, essv6888407, essv6702993, essv6940907, essv6905408, essv6843007, essv6940905, essv6682050, essv6800786, essv6842991, essv6688707, essv6966648, essv6916628, essv6682049, essv6796562, essv6788302, essv6776190, essv6690721, essv6678350, essv6800808, essv6932432, essv6728835, essv6812611, essv6674015, essv6949638, essv6920765, essv6792400, essv6936745, essv6678359, essv6858044, essv6678351, essv6779976, essv6732649, essv6784132, essv6678352, essv6842977, essv6949636, essv6824145, essv6728813, essv6685529, essv6885423, essv6688723, essv6824148, essv6728795, essv6796582, essv6717321, essv6796581, essv6728812, essv6792387, essv6882730, essv6932434, essv6784129, essv6874065, essv6724990, essv6815907, essv6690809, essv6828232, essv6776189, essv6949641, essv6776194, essv6916606, essv6792402, essv6839145, essv6835381, essv6867825, essv6949637, essv6936737, essv6870575, essv6888413, essv6839148, essv6796558, essv6913145, essv6763715, essv6732681, essv6953809, essv6674008, essv6932438, essv6891715, essv6891714, essv6888415, essv6960194, essv6916604, essv6888412, essv6828237, essv6824137, essv6776198, essv6721230, essv6696134, essv6879871, essv6966669, essv6905406, essv6784112, essv6725027, essv6913123, essv6916605, essv6940902, essv6828236, essv6940890, essv6792398, essv6940904, essv6895118, essv6852055, essv6945556, essv6945576, essv6696118, essv6815905, essv6788294, essv6688708, essv6913113, essv6898025, essv6685533, essv6772606, essv6696129, essv6685527, essv6713447, essv6936756, essv6713459, essv6709943, essv6724989, essv6788293, essv6909399, essv6863031, essv6776195, essv6975729, essv6874066, essv6839179, essv6800784, essv6913124, essv6888414, essv6721200

Samples

SSM100, SSM036, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM079, SSM065, SSM087, SSM097, SSM039, SSM013, SSM093, SSM042, SSM088, SSM041, SSM023, SSM028, SSM084, SSM021, SSM047, SSM069, SSM029, SSM096, SSM062, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM031, SSM067, SSM044, SSM014, SSM086, SSM033, SSM066, SSM068, SSM040, SSM072, SSM082, SSM020, SSM015, SSM016, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM091, SSM070, SSM095, SSM025, SSM034, SSM004, SSM099, SSM043, SSM098

Known Genes

Method

Sequencing

Analysis

Breakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads

Platform

Illumina HiSeq 2000

Comments

Reference

Wong_et_al_2012b

Pubmed ID

23290073

Accession Number(s)

esv2714356

Frequency

Sample Size	96
Observed Gain	0
Observed Loss	65
Observed Complex	0
Frequency	n/a