A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2714219



Internal ID10297855
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:32520855..32522446hg38UCSC Ensembl
Outerchr16:32532176..32533767hg19UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381592
hg191592
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6806762, essv6678324, essv6673986, essv6809769, essv6874046, essv6752928, essv6895097, essv6943073, essv6738245, essv6702966, essv6960142, essv6928345, essv6758568, essv6685509, essv6909363, essv6796538, essv6750028, essv6905381, essv6784085, essv6752042, essv6871106, essv6741517, essv6706651, essv6776171, essv6842956, essv6945524, essv6772582, essv6665504, essv6776688, essv6735509, essv6971358, essv6877072, essv6828215, essv6898012, essv6788272, essv6692016, essv6949610, essv6888389, essv6975506, essv6763695, essv6768892, essv6810143, essv6724962, essv6920750, essv6916581, essv6682026, essv6713428, essv6932390, essv6742109, essv6824122, essv6852016, essv6953786, essv6940863, essv6858007, essv6891692, essv6792362, essv6696099, essv6879840, essv6863007, essv6688682, essv6728775, essv6812590, essv6717301, essv6690599, essv6835347, essv6882698, essv6820296, essv6732623, essv6815874, essv6721175, essv6839122, essv6803860, essv6924861, essv6699092, essv6846351, essv6966603, essv6901789, essv6901004, essv6744372, essv6867795, essv6936691, essv6779953, essv6755951, essv6831799, essv6913088
SamplesSSM100, SSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM064, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM088, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM029, SSM096, SSM062, SSM026, SSM089, SSM017, SSM019, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM085, SSM068, SSM081, SSM040, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM022, SSM091, SSM070, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM098, SSM049, SSM056, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2714219
Frequency
Sample Size96
Observed Gain0
Observed Loss85
Observed Complex0
Frequencyn/a


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