A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2714107



Internal ID10297743
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:83019077..83019474hg38UCSC Ensembl
Outerchr1:83484760..83485157hg19UCSC Ensembl
Cytoband1p31.1
Allele length
AssemblyAllele length
hg38398
hg19398
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6669053, essv6821253, essv6950621, essv6789218, essv6972467, essv6829064, essv6776990
SamplesSSM079, SSM029, SSM031, SSM067, SSM081, SSM070, SSM025
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2714107
Frequency
Sample Size96
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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