A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2678590



Internal ID9598009
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32555039..32579945hg38UCSC Ensembl
Outerchr6:32554618..32580415hg38UCSC Ensembl
Innerchr6:32522816..32547722hg19UCSC Ensembl
Outerchr6:32522395..32548192hg19UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3825798
hg1925798
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1108e199
Supporting Variantsessv5470506, essv5926443, essv5938865, essv6160921, essv6300378, essv5848097, essv5945503, essv5556876, essv5945064, essv6284725, essv6408898, essv5623546, essv6246749, essv5411828, essv5673902, essv6023312, essv6510753, essv6186303, essv6107535, essv5847925, essv6573619, essv6022440, essv6310298, essv6392021, essv5654389, essv6559443, essv6084513, essv6514075, essv5606113, essv6155285, essv5821130, essv5509463, essv6157056, essv5447743, essv5482755, essv5811672, essv5942881, essv5680461, essv5654654, essv6519245, essv5529970, essv5646821, essv5705193, essv6140250, essv6441605, essv5414035, essv5520129, essv6075101, essv6380416, essv6210349, essv6338221, essv5719474, essv6332847, essv6457585, essv6128593, essv6561836, essv6586505, essv5780689, essv6408989, essv5985013, essv6356642, essv5454358, essv5881208, essv5917051, essv6529681, essv6010959, essv5749024, essv6320031, essv5858723, essv5962187, essv5432750, essv6254795, essv5660774, essv5578731, essv6208635, essv6252119, essv5778070, essv5808119, essv5480020, essv6126994, essv5654355, essv6030552, essv5678589, essv6194800, essv6260439, essv6467230, essv6113043, essv5482155, essv5437665, essv5570806, essv5697950, essv6519731, essv6102040, essv6256432, essv5780334, essv6482178, essv5975727, essv5983396, essv5905402, essv5891355, essv6304079, essv5591271, essv5681470, essv6183543, essv6407804, essv6555761, essv5698458, essv5436632, essv6177115, essv5622257, essv5939010, essv6189797, essv5725067, essv6333465, essv5946908, essv6239046, essv6130271, essv6561236, essv6432691, essv6166055, essv6093486, essv5599892, essv5965549, essv6012533, essv5599255, essv5729508, essv6004012, essv6326052, essv5488284, essv5854804, essv6281820, essv6578327, essv6043595, essv5872308, essv5764821, essv5515398, essv5757285, essv6594309
SamplesHG00626, HG00650, HG00542, HG00442, HG00592, HG00536, HG00608, NA18621, HG00671, NA18592, HG00559, HG00524, NA18565, NA18561, NA18599, NA18603, HG00699, NA18545, HG00566, NA18606, NA18616, HG00449, HG00654, NA18526, NA18633, NA18602, HG00693, NA18627, HG00663, NA18563, NA18597, HG00702, HG00689, HG00448, NA18635, NA18567, NA18547, HG00634, NA18618, HG00610, NA18574, NA18582, NA18571, HG00537, HG00512, HG00683, NA18560, HG00534, NA18617, HG00422, HG00427, NA18557, HG00530, HG00419, NA18539, NA18638, HG00464, NA18614, HG00543, HG00560, NA18605, NA18613, HG00629, NA18538, HG00596, HG00557, HG00428, HG00653, HG00701, HG00657, HG00436, HG00556, HG00533, HG00583, NA18637, HG00500, NA18572, NA18534, NA18630, HG00619, HG00708, HG00692, NA18566, NA18573, HG00651, NA18626, HG00690, HG00404, HG00479, NA18532, HG00613, HG00525, NA18553, NA18555, HG00463, NA18536, NA18570, NA18634, NA18593, NA18541, NA18576, NA18546, NA18608, HG00611, NA18632, HG00476, NA18542, HG00625, NA18564, NA18628, HG00580, HG00473, HG00607, HG00662, HG00418, NA18615, HG00620, HG00672, HG00614, HG00513, HG00578, HG00478, NA18631, HG00421, HG00656, NA18609, NA18552, HG00595, HG00472, HG00628, NA18624, NA18623, NA18622, HG00437, NA18562, NA18577, NA18620, HG00593
Known GenesHLA-DRB1, HLA-DRB6
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
Comments
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2678590
Frequency
Sample Size1151
Observed Gain0
Observed Loss138
Observed Complex0
Frequencyn/a


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