Variant Details

Variant: esv2678522

Internal ID

9597941

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
	chr17:73373866..73374703	hg38	UCSC Ensembl
	chr17:71370005..71370842	hg19	UCSC Ensembl

Cytoband

17q25.1

Allele length

Assembly	Allele length
hg38	838
hg19	838

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

dgv565e199

Supporting Variants

essv6126400, essv5681820, essv5836817, essv5664699, essv5608822, essv6235738, essv6238776, essv5909494, essv5862414, essv5631593, essv6309603, essv6356678, essv6497288, essv6129756, essv5698035, essv6402286, essv6254664, essv5823672, essv5435319, essv5684485, essv5594527, essv6540463, essv6407551, essv5661752, essv6547967, essv6175709, essv6565258, essv5697735, essv5515318, essv5840030, essv6103133, essv5848574, essv5950088, essv5478422, essv6414596, essv6097127, essv6000367, essv6448448, essv6134426, essv6537510, essv6420922, essv6564201, essv5769054, essv5747792, essv6003075, essv5940657, essv6009940, essv6498006, essv5426318, essv6069113, essv6536267, essv5751568, essv6404760, essv6407139, essv6538398, essv5873453, essv5606354, essv6201065, essv5948275, essv6137746, essv5873265, essv6051505, essv6590477, essv5413870, essv5771744, essv5680450, essv5950800, essv5721542, essv5995988, essv6517285, essv5885718, essv6361398, essv5437764, essv6527144, essv6489950, essv5907073, essv6129836, essv6426538, essv6064666, essv5994339, essv5543658, essv5413053, essv5692623, essv5600279, essv6392577, essv5748377, essv5630156, essv6333255, essv5959390, essv6244586, essv5827665, essv5755031, essv6494990, essv6074020, essv5955174, essv5639168, essv6341666, essv5793353, essv6125412, essv6442868, essv5598179, essv6461544, essv6049649, essv6357093, essv5683332, essv5523361, essv5436630, essv6100243, essv6134860, essv6410596, essv5566918, essv5701952, essv6299887, essv5514185, essv6010414, essv5709350, essv6331259, essv5884237, essv5806832, essv6164592, essv6245403, essv6417786, essv5421962, essv6405375, essv6415265, essv5753778, essv6332920, essv5413123, essv6119319, essv6373784, essv6458665, essv5604900, essv6289643, essv6073236, essv6578508, essv5705866, essv5482763, essv6497496, essv5588221, essv6134736, essv5778027, essv5789172, essv6211134, essv6510953, essv5912704, essv6162751, essv5786053, essv6017131, essv5418834, essv5890766, essv5829193, essv6379106, essv6225066, essv5810846, essv6158591, essv5816899, essv6401474, essv5914568, essv6201062, essv5745553, essv6280530, essv6436782, essv5471722, essv6357705, essv5549192, essv6492355, essv6285483, essv5790322, essv6076353, essv6064857, essv6065110, essv6129075, essv6331085, essv5717803, essv5987691, essv5420165, essv6157353, essv5964851, essv5502885, essv6353249, essv5758094, essv5903273, essv5719808, essv6542913, essv6461698, essv5545780, essv6118648, essv5944255, essv5961411, essv6536151, essv6487786, essv5505667, essv5617649, essv5567753, essv6040508, essv5431430, essv6267808, essv6300415, essv6101484, essv5555028, essv5640725, essv6571327, essv5605925, essv6558013, essv5901752, essv5650740, essv5817689, essv5608683

Samples

HG00626, HG00650, HG00442, HG01173, NA19058, HG00592, NA19055, HG00608, NA19909, NA18621, HG00671, HG00361, HG00559, NA20783, NA18565, NA19704, NA18599, HG01389, NA18603, NA19350, NA19359, NA18486, HG01465, HG00699, NA19057, HG00566, NA18530, HG00449, NA19443, NA20806, NA19067, HG01140, NA19107, HG00663, NA19446, NA19379, NA18519, HG01070, HG00589, NA19382, NA19448, NA18595, NA19678, HG01488, HG01167, NA19723, NA18635, NA19916, HG01492, NA18942, NA19062, NA18574, NA18582, NA18571, HG01083, NA19138, HG00369, NA19681, NA19904, NA18964, HG00537, NA19079, NA19383, NA18874, NA20775, NA18977, NA18868, NA19372, NA19371, NA19238, HG00534, NA19385, HG00705, NA19722, HG00427, NA19901, NA19189, NA18520, HG01198, HG00637, NA19239, NA18985, NA18908, HG00419, NA19789, NA18539, NA12748, NA18605, NA18613, NA19657, HG00443, NA18538, NA19082, NA19070, NA19077, NA19462, NA19347, HG00701, NA19455, HG00436, NA19982, HG00500, NA18910, NA18534, HG00692, HG00635, NA19064, NA18548, HG00740, NA18907, NA19654, HG01073, NA19449, NA19084, HG00690, HG00531, HG00479, NA18499, HG00684, NA19453, HG01101, HG00525, NA12827, NA19059, NA19761, NA19009, NA18555, NA18963, HG00463, NA19469, HG00126, NA18634, NA18593, NA19675, NA18541, HG01204, NA18546, NA20296, NA18953, NA19401, NA19003, NA18632, HG00476, HG00124, NA18542, NA19390, HG01190, NA19834, NA18961, NA18559, NA19712, NA19434, HG00565, NA19072, NA18950, HG00580, NA19240, NA19010, NA19835, HG00473, HG00607, NA19439, NA19470, HG01108, NA19783, HG00662, HG00418, NA19085, NA06986, HG00125, NA19398, NA19078, HG00614, NA19248, NA19438, NA19472, NA19060, HG00421, NA19713, NA19474, NA19093, HG00174, NA19102, NA18873, NA20807, NA19080, NA20826, NA19711, NA18984, HG00472, NA18989, NA19004, HG01125, NA18624, NA19463, NA07000, NA19065, NA18549, NA19346, NA19074, NA18487, HG00553, HG00437, NA18562, HG00581, NA18577, NA20509, HG00593

Known Genes

SDK2

Method

Merging

Analysis

No reference, merging analysis

Platform

Merging

Comments

High quality site

Reference

1000_Genomes_Consortium_Phase_1

Pubmed ID

23128226

Accession Number(s)

esv2678522

Frequency

Sample Size	1151
Observed Gain	0
Observed Loss	208
Observed Complex	0
Frequency	n/a