A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2678342



Internal ID9597761
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr10:87893066..87893965hg38UCSC Ensembl
chr10:89652823..89653722hg19UCSC Ensembl
Cytoband10q23.31
Allele length
AssemblyAllele length
hg38900
hg19900
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5683514, essv5644029, essv6232032, essv6292997, essv5699070, essv5711949, essv6354563, essv6146367, essv6111282, essv6537371, essv6517659, essv5789183, essv5632254, essv5498114, essv5734052, essv5685819, essv6163459, essv5775886, essv5564303, essv6036018, essv5533971, essv6299006, essv6259036, essv5471642, essv5669711, essv6037572, essv5674857
SamplesHG01441, NA10851, NA12414, NA20532, HG00150, HG00271, NA07346, NA12287, HG00247, NA19384, NA19404, NA20539, HG00277, NA20538, HG00141, NA12043, HG00375, NA07051, HG00237, NA19470, NA06986, HG00339, NA19716, HG00267, NA07000, HG01191, HG01437
Known GenesPTEN
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2678342
Frequency
Sample Size1151
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


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