A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2677861



Internal ID9597280
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:161662669..161663357hg38UCSC Ensembl
chr6:162083701..162084389hg19UCSC Ensembl
Cytoband6q26
Allele length
AssemblyAllele length
hg38689
hg19689
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv5624366, essv6252475, essv5741843, essv5988980, essv6138804, essv5622466, essv5594599, essv5968631, essv6001874, essv5672783, essv6458763, essv6451920, essv6269757, essv5684453, essv5496869, essv5756728, essv6421301, essv6341361, essv6468219, essv6122404, essv6381600, essv6191433, essv5764922, essv6272413, essv6499897, essv6190665, essv5638171, essv6432714, essv6162666, essv6505547, essv5760060, essv6176648, essv5782632, essv6091309, essv6001612, essv5977235, essv5773978, essv6344468, essv5572725, essv6044847, essv6008706, essv5514204, essv6507870, essv6118661, essv6483920, essv6112604, essv5584820, essv5869386, essv5502778, essv5432699, essv6534229, essv5883212, essv6309689, essv5545501, essv6338616, essv6554352, essv6239601, essv5550272, essv5984675, essv5439396, essv5512314, essv6206197, essv5500205, essv6116880, essv5986841, essv6213737, essv5552482, essv6350338, essv6192647, essv6128792, essv6596571, essv6151200, essv6296400, essv5817665, essv6412506, essv5620492, essv5502401, essv5844699, essv5795846, essv5904092, essv6470278, essv6414900, essv6446685, essv5986632, essv5893457, essv6167602, essv6288992, essv6339020, essv6346191, essv6026510, essv6077758, essv6065705, essv6060925, essv5674509, essv6186054, essv5772163, essv5827006, essv6280460, essv5725432, essv6026559, essv6008699, essv6041220, essv6579716, essv6582009, essv5717246, essv6164501, essv5472524, essv5920784, essv6154864, essv5561152, essv5398530, essv5898121, essv5926601, essv6535092, essv5979414, essv5995541, essv6190489, essv5543696, essv5594009, essv6253424, essv6578511, essv6453160, essv6330261, essv6128394, essv6405027, essv5474681, essv5651530, essv6369196, essv5705379, essv6336064, essv5663692, essv6429003, essv5680256, essv6511786, essv6253899, essv5912059, essv5695294, essv6336442, essv6096316, essv6400281, essv6593573, essv5743936, essv6107259, essv6447699, essv6040863, essv5624656, essv6175741, essv6001405, essv6510011, essv6174138, essv5968047, essv6032690, essv6297878, essv6334488, essv6570226, essv5527102, essv5625275, essv5619670, essv6284890, essv6079861, essv5726234, essv5435755, essv6566144, essv5551348, essv6465175, essv6247029, essv5851326, essv5978439, essv5577590, essv5618018, essv5830233, essv6136055, essv5581074, essv5492043, essv6115957, essv6140492, essv5984554, essv5870474, essv6418229, essv5777804, essv6331911, essv5445290, essv6554123, essv6221461, essv6539640, essv6050123, essv5485575, essv5593784, essv6033814, essv6268446, essv6365172, essv6440925, essv5588685, essv5771018, essv5751848, essv5728126, essv5963918, essv6425188, essv6591615, essv5628832, essv5546159, essv5609687, essv5650326, essv5475811, essv5978082, essv6492863, essv5880974, essv6227184, essv6165863, essv6248995, essv6270160, essv6353205, essv5626760, essv6454362, essv6386958, essv5881979, essv6393937, essv5555652, essv5703462, essv5692971, essv6125895, essv5597954, essv6253755, essv6570452, essv6035863, essv6428310, essv6238367, essv6001462, essv6024858, essv5843209, essv6468322, essv6093748, essv6488030, essv6580740, essv6558067, essv5592278, essv6174098, essv6188966, essv6458007, essv6529576, essv5858543, essv6135155, essv5993487, essv6017563, essv6288315, essv6266205, essv5737806, essv6151611, essv6035651, essv5403493, essv5419436, essv6540826, essv5619289, essv5716871, essv6131868, essv5476104, essv6430366
SamplesHG01441, NA19012, NA18621, HG00157, HG00313, NA12249, HG00318, HG00536, HG00607, HG01440, NA12750, NA20514, HG00182, NA19904, NA20527, NA18534, NA18530, NA18535, HG01072, HG01519, NA12286, NA18561, NA19081, NA19819, NA20506, HG00551, NA12342, NA19404, NA18952, HG00705, HG00500, HG01173, HG00171, HG00369, HG00731, HG00245, HG00464, NA20544, HG00565, NA18526, HG00310, NA18550, NA12340, NA20802, NA20759, HG00463, HG01197, HG00657, HG01051, HG00117, HG00189, NA20808, HG01492, HG00428, NA18947, NA19010, HG00375, HG00542, HG01174, NA19338, HG00326, HG01491, NA18573, NA19920, NA18542, NA18541, NA18546, HG00683, HG00698, NA20805, NA18963, NA19685, HG00187, HG00404, NA07051, NA19651, NA20314, HG00651, NA19004, HG00557, HG00366, HG00177, NA19701, HG00146, NA18965, NA18488, HG00737, HG00253, NA20803, NA18943, HG00353, NA18596, NA18628, NA18868, HG01133, NA19077, NA19762, HG00543, HG00154, NA18559, HG00339, NA19914, NA20761, NA19067, NA19085, HG00346, NA19054, NA19076, HG00308, NA11994, NA18635, NA19057, NA19068, NA18536, NA19660, HG00140, NA12155, HG00096, NA20757, HG01048, HG00231, NA18990, HG00372, HG01047, NA19083, HG00330, NA18956, NA19440, NA19066, NA18959, HG00258, HG01113, HG01136, NA18637, NA19075, HG00264, HG00254, HG00276, HG00403, NA18634, NA19684, HG00133, NA18539, HG00114, NA12751, NA19055, NA19676, HG00306, NA19725, HG00620, HG01437, NA07346, NA12046, HG00108, HG00653, HG00732, NA19373, HG00325, NA20790, NA20795, NA18986, NA06986, HG00260, NA19657, HG01073, NA18558, NA18977, HG00239, NA18941, HG00478, NA18564, NA18961, HG00513, HG00524, NA19720, NA18988, HG00329, HG00534, HG01070, NA19707, NA20766, HG00246, NA19074, HG01060, NA20813, HG00589, NA19777, HG00427, HG01137, NA18597, NA20537, NA18552, NA12272, NA18599, HG01334, NA20799, NA19394, NA12413, NA18565, HG00663, NA12889, NA18560, NA18989, HG00580, NA18544, HG00311, HG00448, NA18602, NA19755, HG00608, NA19649, NA20507, NA20513, NA18548, NA20317, NA19064, NA20810, HG00281, NA19063, NA18917, NA12399, NA12546, NA12842, HG00142, NA19198, HG01108, NA19070, NA18611, NA19130, HG00119, HG00324, HG00625, NA18574, HG00183, HG00442, NA19350, HG01489, HG00626, HG00684, HG01377, HG01110, HG00336, NA20502, HG00671, NA20772, HG00272, NA19468, HG00271, HG00278, NA19779, NA19065, NA19058, HG00531, NA18553, HG00327, HG00361, HG00323
Known GenesPARK2
MethodMerging
AnalysisNo reference, merging analysis
PlatformMerging
CommentsHigh quality site
Reference1000_Genomes_Consortium_Phase_1
Pubmed ID23128226
Accession Number(s)esv2677861
Frequency
Sample Size1151
Observed Gain0
Observed Loss257
Observed Complex0
Frequencyn/a


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